Some tutorials
==============

A good starting point is :ref:`tutorials/basic_tutorial:easyvvuq - basic concepts`, followed by some information on encoders and decoders :ref:`tutorials/encoder_decoder_tutorial:how to set-up your simulation code for use with easyvvuq: encoders and decoders`.

Examples based on the Ishigami function
---------------------------------------------

#. :ref:`tutorials/easyvvuq_ishigami_mc_tutorial:run an easyvvuq campaign to analyze the sensitivity for the ishigami function using mcsampler`
#. :ref:`tutorials/easyvvuq_ishigami_tutorial:sensitivity analysis for the ishigama function using pce`
#. :ref:`tutorials/easyvvuq_ishigami_with_noise_tutorial:sensityivity analysis for the ishigama function with noise using pce`


Examples based on the fusion workflow
-------------------------------------

#. :ref:`tutorials/easyvvuq_fusion_dask_tutorial:run the fusion easyvvuq campaign using pce`
#. :ref:`tutorials/easyvvuq_fusion_sc_dask_tutorial:run the fusion easyvvuq campaign using sc`
#. :ref:`tutorials/easyvvuq_fusion_tutorial:easyvvuq fusion tutorial`

Examples using QCG-PJ
---------------------

#. :ref:`tutorials/basic_tutorial_qcgpj:running easyvvuq on hpc resources with qcg-pilotjob`

Examples using Polynomial Chaos Expansion (PCE)
-----------------------------------------------

#. :ref:`tutorials/basic_tutorial:easyvvuq - basic concepts`
#. :ref:`tutorials/easyvvuq_fusion_dask_tutorial:run the fusion easyvvuq campaign using pce`
#. :ref:`tutorials/easyvvuq_fusion_tutorial:easyvvuq fusion tutorial`
#. :ref:`tutorials/easyvvuq_ishigami_tutorial:sensitivity analysis for the ishigama function using pce`
#. :ref:`tutorials/easyvvuq_ishigami_with_noise_tutorial:sensityivity analysis for the ishigama function with noise using pce`
#. :ref:`tutorials/jinja_tutorial:easyvvuq - jinja encoder tutorial`
#. :ref:`tutorials/kubernetes_tutorial:easyvvuq and cloud execution via kubernetes`
#. :ref:`tutorials/vector_qoi_tutorial:easyvvuq - vector quantities of interest`
#. :ref:`tutorials/correlated/coffe_cup-pce:a cooling coffee cup with polynomial chaos expansion`
#. :ref:`tutorials/correlated/coffe_cup-fd:a cooling coffee cup with polynomial chaos expansion`

Examples using Stochastic Collocation (SC)
------------------------------------------

#. :ref:`tutorials/basic_tutorial_qcgpj:running easyvvuq on hpc resources with qcg-pilotjob`
#. :ref:`tutorials/dimension_adaptive_tutorial:dimension adaptive sampling tutorial`
#. :ref:`tutorials/dimension_adaptive_tutorial_fusion:dimension adaptive sampling tutorial applied to the fusion example`
#. :ref:`tutorials/easyvvuq_fusion_sc_dask_tutorial:run the fusion easyvvuq campaign using sc`
#. :ref:`tutorials/easyvvuq_ishigami_sc_tutorial:sensitivity analysis of ishigami function with stochastic collocation`
#. :ref:`tutorials/mega_tutorial:**easyvvuq tutorial**`
#. :ref:`tutorials/simplex_stochastic_collocation_tutorial:simplex stochastic collocation tutorial`

Examples using MC, QMC or MCMC Sampling
---------------------------------
#. :ref:`tutorials/easyvvuq_ishigami_mc_tutorial:run an easyvvuq campaign to analyze the sensitivity for the ishigami function using mcsampler`
#. :ref:`tutorials/mcmc_tutorial:markov-chain monte carlo in easyvvuq`
#. :ref:`tutorials/mega_tutorial:**easyvvuq tutorial**`

Examples using Adaptive Dimension
---------------------------------

#. :ref:`tutorials/dimension_adaptive_tutorial:dimension adaptive sampling tutorial`
#. :ref:`tutorials/dimension_adaptive_tutorial_fusion:dimension adaptive sampling tutorial applied to the fusion example`

Examples using Kubernetes
-------------------------
   
#. :ref:`tutorials/kubernetes_tutorial:easyvvuq and cloud execution via kubernetes`
#. :ref:`tutorials/mega_tutorial:**easyvvuq tutorial**`
   

.. toctree::
   :caption: Table of tutorials
   :maxdepth: 1

   tutorials/basic_tutorial_qcgpj.ipynb
   tutorials/basic_tutorial.ipynb
   tutorials/dimension_adaptive_tutorial_fusion.ipynb
   tutorials/dimension_adaptive_tutorial.ipynb
   tutorials/easyvvuq_fusion_dask_tutorial.ipynb
   tutorials/easyvvuq_fusion_SC_dask_tutorial.ipynb
   tutorials/easyvvuq_fusion_tutorial.ipynb
   tutorials/easyvvuq_in_r.ipynb
   tutorials/easyvvuq_Ishigami_MC_tutorial.ipynb
   tutorials/easyvvuq_Ishigami_SC_tutorial.ipynb
   tutorials/easyvvuq_Ishigami_tutorial.ipynb
   tutorials/easyvvuq_Ishigami_with_noise_tutorial.ipynb
   tutorials/easyvvuq_mcmc.ipynb
   tutorials/encoder_decoder_tutorial.ipynb
   tutorials/fusion-aleatoric-sobol.ipynb
   tutorials/hyperparameter_tuning_tutorial_with_fabsim.ipynb
   tutorials/hyperparameter_tuning_tutorial.ipynb
   tutorials/jinja_tutorial.ipynb
   tutorials/kubernetes_tutorial.ipynb
   tutorials/mcmc_tutorial.ipynb
   tutorials/mega_tutorial.ipynb
   tutorials/simplex_stochastic_collocation_tutorial.ipynb
   tutorials/vector_qoi_tutorial.ipynb
   tutorials/correlated/coffe_cup-fd.ipynb
   tutorials/correlated/coffe_cup-pce.ipynb